The Antibody Society

the official website of the antibody society

The Adaptive Immune Receptor Repertoire Community of The Antibody Society

  • LOG IN
  • BECOME A MEMBER
  • About
    • Mission & Activities
    • Board of Directors
    • Our Staff & Volunteers
    • The Antibody Society’s Standing Committees
      • AIRR Community Committee
      • Communication & Membership Committee
      • Executive Committee
      • Finance & Audit Committee
      • Governance & Nominating Committee
      • Initiatives Committee
      • Meetings Committee
    • Sponsors & Partners
  • Society meetings
    • Biopharmaceutical Informatics Symposium
    • Emerging Cancer Therapies Leveraging Gamma-Delta Effector T cells Symposium
    • Emerging Immunotherapeutics for Ovarian Cancer Symposium
    • AIRR Community Meetings
    • Antibody Engineering & Therapeutics (US) 2022
      • 2020 Antibody Engineering & Therapeutics
      • 2019 Antibody Engineering & Therapeutics
      • 2018 Antibody Engineering & Therapeutics
      • What is INN a Name?
        • INN issue updates
    • Antibody Engineering & Therapeutics Europe 2022
    • FOCIS Symposia
  • AIRR Community
    • AIRR-C 2022 Votes
    • AIRR News
    • AIRR Community Service Prize 2022
    • AIRR Publications
    • AIRR Meetings
      • AIRR Community Meeting VI: “Exploring New Frontiers”
      • AIRR Community Meeting V: “Zooming in to the AIRR Community”
      • AIRR Community Meeting V Pre-Meetings
        • AIRR-seq in the Pandemic
        • AIRR-seq Biological Standards and Workflows
      • AIRR Community Special Event: “Response to COVID-19”
      • AIRR Community Meeting IV: “Bridging the Gaps”
      • AIRR Community Meeting III
        • Day 1
        • Day 2
        • Day 3
        • Day 4
      • AIRR Community Meeting II
      • AIRR Community Meeting I
    • AIRR Community Working Groups
      • Biological Resources Working Group
      • Common Repository Working Group
      • Diagnostics Working Group
      • Germline Database Working Group
      • Legal and Ethics Working Group
      • Software Working Group
      • Standards Working Group
    • AIRR Community Sub-committees
      • Communications Sub-committee
      • Executive Sub-committee
      • Inferred Allele Review Committee
      • Meetings Sub-committee
    • AIRR Data Commons
    • AIRR Community Calendar
    • AIRR Community Webinar Series
    • On AIRR – An AIRR Community Podcast
    • AIRR Community Resources
  • Members only
    • Login
    • Note to members
    • James S. Huston Antibody Science Talent Award
      • 2020 James S. Huston Antibody Science Talent Award Recipient
      • JSH Award Criteria
    • Research Competitions
    • Science Writing Competition
      • Science Writing Competition Winners
    • Discount codes for meeting registration
    • Antibodies in early-stage studies
    • Presentations
  • Upcoming meetings
  • Web Resources
    • Society Publications
    • Antibody News
    • Antibody therapeutics approved or in regulatory review in the EU or US
      • Antibody therapeutics product data
    • Antibodies in late-stage clinical studies
    • Research Resources
    • Education Resources
  • Career Center
    • Career Shorts
  • Learning Center
    • Upcoming Webinars
    • Adaptive Immune Receptor Repertoires
    • Antibody Discovery & Development
    • Commercializing Antibody Therapeutics
    • Antibodies to Watch
    • Antibody Validation
  • COVID-19
    • Guide to “Coronavirus in the Crosshairs”
    • COVID-19 Biologics Tracker
    • Meeting Report: The Diagnostic Landscape for COVID-19
You are here: Home / Archives for Adaptive Immune Receptor Repertoire Community

Announcing AIRR Community Service Prize 2022 Nominations!

March 16, 2022 by Pam Borghardt

The lifeblood of the AIRR Community is its members and others who join us, typically on a volunteer and uncompensated basis, to advance the AIRR Community mission to standardize, analyze and share AIRR-seq data. The AIRR Community Service Prize recognizes individuals who have contributed to the AIRR Community in significant and often under-appreciated ways.

 

 

Activities exemplifying the award criteria include:

  • Participating in one or more Working Groups or Sub-committees
  • Mentoring junior or trainee members
  • Assisting with organizing meetings, publications, or other communications 
  • Contributing to the AIRR Data Commons, e.g. substantial reviewing or data deposits
  • Other tasks that, in the opinion of AIRR Community leaders, constitute selfless acts of citizenship that reflect our core mission and values

The AIRR Community Service Prize(s) recipient(s) will be announced and awarded at the Gala Dinner during the AIRR Community Meeting VI in May 2022.

Nomination Criteria:

  • Must be a Member to nominate
  • Nominate more than one nominee
  • Don’t need to be a Member to receive the award
  • Nominations close April 10th, 2022

 Click here to log in to vote (AIRR Community Members only).

Filed Under: AIRR Community Tagged With: Adaptive Immune Receptor Repertoire Community

AIRR-C Meeting VI – Registration Is Live!

March 4, 2022 by Pam Borghardt

The AIRR-C Meetings Sub-committee is excited to announce that registration is live!  Be sure to sign up soon to take advantage of the early bird discount!

AIRR Community Meeting VI “Exploring New Frontiers” will be held in La Jolla, CA from May 17-19, 2022.

REGISTER NOW

Exploring New Frontiers:  This meeting has two themed “Challenge Sessions” meant to:
(i) Initiate and implement a strategic plan for the AIRR Community that integrates the Working Groups’ activities toward the central goal of universally accepted AIRR-seq data standards;
(ii) Introduce the Community to multidimensional systems approaches for characterizing immune responses, and how AIRR-seq data can benefit such approaches.

 

Meetings and presentations will take place at the Hilton La Jolla Torrey Pines and a hotel room block has been arranged at a discounted rate. The meeting will provide opportunities for investigators and trainees to network, participate in AIRR Community Working Groups and Sub-committee meetings, enjoy world class presentations, poster sessions, and deep dive tutorials.

Sign up today!

Filed Under: Adaptive immune receptor repertoire, AIRR Community Tagged With: Adaptive Immune Receptor Repertoire Community

Three newly certified AIRR-compliant software tools: ImmuneML, CompAIRR and Dandelion

December 9, 2021 by Pam Borghardt

The AIRR Community is excited to announce that three tools have recently been certified as compliant with the AIRR-C v1.0 standard for AIRR-Seq software tools. These are ImmuneML – an ecosystem for machine learning analysis of adaptive immune receptor repertoires, CompAIRR – a tool for ultra-fast comparison of adaptive immune receptor repertoires by exact and approximate sequence matching, and Dandelion – a tool for analyzing single cell BCR/V(D)J 10x Genomics data. 

In an effort to enable rigorous and reproducible immune repertoire research at the largest scale possible, the AIRR-C Software Working Group has established a standard to validate software tools using the AIRR-C Standards and meeting a series of interoperability and quality criteria. Developers interested in certifying their tools should complete the checklist and submit it to the AIRR-C Software Working Group for evaluation and ratification by its members.

More details can be found at the website AIRR Software WG – Guidance for AIRR Software Tools.

All compliant tools will be issued a badge and listed on the website AIRR Software WG – List of Tools Certified as Compliant. The list includes SONAR, ImmuneDB, Immcantation, ImmuneML, CompAIRR and Dandelion.

Filed Under: AIRR Community Tagged With: Adaptive Immune Receptor Repertoire Community, bioinformatics, Data Standards, diagnostics

Latest AIRR Community seminar available on YouTube

November 8, 2021 by Pam Borghardt

If you are interested in understanding how to perform easy, fast and practical AIRR analysis, check out the latest video on the AIRR Community YouTube channel.

Learn about the “Exploration of single-cell and bulk immune repertoire data in R using Immunarch with application to immunotherapy” by speaker Vadim I. Nazarov, Co-Founder and CEO, ImmunoMind.

 

 

Filed Under: Adaptive immune receptor repertoire, AIRR Community Tagged With: Adaptive Immune Receptor Repertoire Community, immunotherapy, single cell

Join us for “Fundamentals of the Immune System”, Parts I & II

May 24, 2021 by Janice Reichert

Part I:  Organization of the immune system.
Thursday June 3, 2021, 11am – 1pm ET. 

Part II:  The immune system in action.
Tuesday June 15, 2021, 11am – 1pm ET.

In this 2-part workshop on the fundamentals of the immune system, Dr. Jamie Scott, Professor Emerita, Simon Fraser University, Canada, will first provide an overview of humoral and cellular immunity, and the basic structure of the immune system, including its cells, tissues and compartments, along with the “superhighway” of the immune system: the circulatory and lymphatic systems. In that context, innate and adaptive immune systems and their interaction, and the general timing and dynamics of immune responses will be presented.

The processes of lymphocyte development, including the various B- and T-cell subsets, positive and negative selection, and the genetic basis of B-cell and T-cell receptor diversification, will be presented to provide a clear idea of what adaptive-immune receptor repertoires (AIRRs) are, and in general terms, how they are currently assessed via high-throughput sequencing. Dr. Scott will then cover the signaling, activation, proliferation and differentiation of T-cell and B-cell clones in the context of lymphoid compartments where antigen is concentrated and presented to naïve and memory B and T cells. The role of co-stimulation in determining the type immune response generated will be emphasized.

In Part II, Dr. Scott will review the orchestration of systemic and mucosal immune responses, including the roles of tolerance and inflammation in these processes. Examples of immune responses to vaccines, chronic viral infection, and/or cancer, as well as autoimmunity, will be presented as variations on a common theme, reiterating the dynamics of the immune response. Some engineered immunotherapies, such as therapeutic antibodies, CAR-T cells and dendritic-cell vaccines, will be introduced as well.

The importance of AIRR-sequencing data to our understanding of immune responses will be emphasized throughout the latter half of this workshop.

Click here to register for Part I

Click here to register for Part II

Filed Under: AIRR Community, Immunology Tagged With: Adaptive Immune Receptor Repertoire Community, immunology

Next Page »

AIRR Community News

AIRR Community Merchandise Shop Now Open!

April 28, 2022 By Pam Borghardt

The AIRR Communications Sub-committee is pleased to announce the launch of an online merchandise shop featuring AIRR Community logo’d merchandise. Shirts, hoodies, tote bags and stickers are currently available, with additional designs to be added in the future. Be sure to check out the special Immuno-Collection while you are browsing! All products are constructed from certified […]

AIRR Community 2022 Executive Sub-committee Election

April 4, 2022 By Pam Borghardt

With each major meeting interval of the AIRR Community, elections are held for leadership positions on the AIRR-C Executive Sub-committee.  This spring, per our governance, we are seeking nominations for Executive SC Chair-Elect and up to three members of the Executive SC. To nominate an individual to serve on the AIRR-C Executive SC, the nominator […]

AIRR-C WG/SC Calls

All times are in ET (Americas/New York)

Click here for full calendar view

Call - ComRepo
10:00
Thu, May 26, 2022
BioRes WG - Call
10:00
Wed, June 1, 2022
Call - Software
11:30
Wed, June 1, 2022
Call - Legal & Ethics
12:00
Mon, June 13, 2022
Call - Standards
14:00
Mon, June 13, 2022

Recent AIRR Publications

  • Trück J et al, Biological controls for standardization and interpretation of adaptive immune receptor repertoire profiling (eLife, 2021)
  • Arnaout RA, Prak ETL, Schwab N, Rubelt F. Adaptive Immune Receptor Repertoire Community. The Future of Blood Testing Is the Immunome. (Frontiers in Immunology, 2021).

 
See all publications

Archives

Follow Us Online

  • Email
  • LinkedIn
  • Twitter
  • YouTube
  • Slack
  • Home
  • Privacy & Terms of Use
  • About
  • Board of Directors
  • Advisors
  • Sponsors & Partners
  • Mission & Activities
  • Join the Society
  • Membership Levels
  • Members only
  • Login
  • Antibody therapeutics approved or in regulatory review in the EU or US
  • Meeting reports
  • Presentations
  • Contact

©2015 - scicomvisuals