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You are here: Home / The AIRR Community / AIRR Community Working Groups / Common Repository Working Group

Common Repository Working Group

Purpose:

To promote and facilitate deposit, access, and sharing/reuse of IG and TCR AIRR-seq datasets through the creation of common repositories that enable:

  • standardized queries of processed AIRR-seq data
  • re-analysis of raw and processed AIRR-seq data utilizing repository analysis tools
  • download of raw and processed AIRR-seq data for offline re-analysis

Goals:

Plans for 2022/23 include:

  • Adapting recommendations as required
  • Continuing to focus on promoting and advancing the AIRR Data Commons
  • Evolution of AIRR Standards and the ADC API
  • Create a searchable programmatic AIRR Repository ADC registry

Members:

Co-leaders: Brian Corrie and Artur Rocha

Members: George Blanck, Felix Breden, Christian Busse, Brian Corrie (Co-lead), Scott Christley, Lindsay Cowell, Uri Hershberg, Enkelejda Miho, Marco Amaro Oliveira, Bjoern Peters, Artur Rocha (Co-lead), Areen Shtewe, Adrien Six, Ulrik Stervbo, Corey Watson.

Related Resources:

Visit the Common Repository Working Group Project on GitHub for latest updates.

Recommendations from the Common Repository Working Group for discussion and adoption by the AIRR Community.

Visit the AIRR Standards Documentation.

Products:

  • AIRR Data Commons (ADC)
  • ADC API
  • ADC Registry

Contact: common-repository@airr-community.org

AIRR Community News

TRUST4 is now certified as AIRR-compliant

March 1, 2023 By Edel Aron

The AIRR Community is excited to announce that TRUST4 has been certified as compliant with the AIRR-C v1.0 standard for AIRR-Seq software tools. TRUST4 (Tcr Receptor Utilities for Solid Tissue 4) is a tool for assembling BCRs and TCRs from bulk and single-cell RNA-Seq data. In an effort to enable rigorous and reproducible immune repertoire […]

AIRR Data Commons and iReceptor Science Gateway Start Major Collaboration with Type-1 Diabetes Researchers

January 11, 2023 By Pam Borghardt

The AIRR Community is pleased to announce the addition of a new Type 1 Diabetes (T1D) focused repository in the AIRR Data Commons. This is a collaboration between the iReceptor team (Simon Fraser University), The Sugar Science group, the Aaron Michels Lab (University of Colorado), and the Todd Brusko Lab (University of Florida) among others. This repository contains the first fully HLA/MHC […]

AIRR-C WG/SC Calls

All times are in ET (Americas/New York)

Click here for full calendar view

DST Anomaly
Sun, March 12, 2023
Common Repository WG
11:00
Thu, April 6, 2023
Diagnostics WG
11:00
Tue, April 11, 2023
Standards WG
14:00
Mon, April 17, 2023
Call - GLDB WG (Eastern Hemisphere)
4:00
Wed, April 19, 2023

Recent AIRR Publications

Lees W.D. et al. AIRR Community curation and standardised representation for immunoglobulin and T cell receptor germline sets (Immunoinformatics, 2023)

See all publications

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