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You are here: Home / The AIRR Community / AIRR Community Meetings / AIRR Community Meeting III / Day 2 – AIRR Community 2017

Day 2 – AIRR Community 2017

Monday, December 4, 2017 ~ NIAID’s Fishers Lane Facility

Scientific Presentations: Sessions 1 – 3

See below for links to Webinars and presentation materials

8:30 – 8:40 Introduction to the Day’s Agenda ~ Room 1D13

Session 1: Germline Gene Inference Tools

Moderator’s Introduction:

Andrew Collins, University of New South Wales

8:45 – 9:05

 

9:05 – 9:25

 

9:25 – 9:35

 Presentation 1 – TIgGER for IGHV Gene Inference (Presentation)

Steve Kleinstein, Yale University

Presentation 2 – IgDiscover for IGHV Gene Inference

Martin Corcoran, Karolinska Institute

Shared Q&A

9:35 – 10:00

 

10:00 – 10:10

 

10:10 – 10:30

 Presentation 3 – Evaluation and Validation of Germline Gene Inference

Mats Ohlin, Lund University

Q&A

 

Panel Discussion: Validation & Comparison of Inference Tools

 10:30 – 10:45  Break
 10:45 – 10:55  Session 2: IGH Genomic Haplotypes

Moderator’s Introduction:

Marie-Paule Lefranc, IMGT, University of Montpellier

10:55 – 11:20

 

11:20 – 11:30

 Presentation 1 – Characterizing Germline Immunoglobulin Diversity in Human and Mouse

Corey Watson, University of Louisville Medical School

Q&A

11:30– 11:55

 

 

11:55 – 12:05

 Presentation 2 – Role of Novel Regulatory Elements in the Formation of the Ig-k Repertoire

Ann Feeney, The Scripps Research Institute

Q&A

12:05 – 12:30

 

12:30 – 12:40

 

12:40 – 1:00

 Presentation 3 – Immunogenomics of the Rhesus macaque, an animal model for HIV vaccine development

Akshaya Ramesh, University of California, San Francisco   Q&A

 

AIRR Community Discussion

Discussion Leaders: Marie-Paule Lefranc & Corey Watson

IGH Haplotype and Germline Gene Nomenclatures

1:00 – 1:45  Boxed Lunches & Poster Session I ~ LD10 Lower Level
1:45 – 2:15 Minimal Standards Implementation Demos

Steven Kleinstein, Nina Prak, Florian Rubelt, Christian Busse, & Syed Ahmad Chan Bukhari

2:15 – 2:25 Session 3: IP Issues in Data Sharing across Shared Repositories

Moderator’s Introduction:

Tania Bubela, Simon Fraser University

2:45 – 3:05 Presentation 1 – Learnings from Publicly Available Immune Receptor Datasets

Harlan Robins, CEO, Adaptive Biotechnologies (Presentation)

2:45 – 3:05 Presentation 2 – On the Human Immunome Project

Jim Crowe, Vanderbilt University

3:05 – 3:25 Break
3:25 – 3:45 Presentation 3 – Intellectual Property Law

Jacob Sherkow, New York Law School

4:30 – 5:00 Panel – IP Issues in Data Sharing

Harlan Robins, Jim Crowe & Jacob Sherkow

4:30 – 5:00 Common Repository WG: Resolving IP and Protected Sequences

Discussion and Community Vote

Lindsay Cowell & Corey Watson

5:00 End of Day at NIAID’s Fishers Lane Facility ~

Attendees return to Washington DC/Rockville Hilton Hotel

5:30 – 7:45

 

 

5:30 – 6:30

6:30 – 7:00

 

7:00 – 7:45

Reception and Tool Demos at the Washington DC/Rockville Hilton Hotel

Snacks provided ~ cash bar ~ Eisenhower Room

No government funds will be used for food and drinks

 

5 minute Tool Demonstrations

Panel on validation and improvement of AIRR analysis tools

 

Face-to-face tool demonstrations by teams

 

 

NIH Webinar Session Monday December 4, 2017 morning: Germline Gene Inference

 

NIH Webinar Session Monday December 4 2017 late morning: IGH Haplotypes & afternoon: Working Group Reports and IP Issues in Data Sharing

 

 

Meeting Materials:

Robins IARR talk 12-4-17

Kleinstein_AIRR_Community_TIgGER.2017

AIRR Community News

AIRR Community Merchandise Shop Now Open!

April 28, 2022 By Pam Borghardt

The AIRR Communications Sub-committee is pleased to announce the launch of an online merchandise shop featuring AIRR Community logo’d merchandise. Shirts, hoodies, tote bags and stickers are currently available, with additional designs to be added in the future. Be sure to check out the special Immuno-Collection while you are browsing! All products are constructed from certified […]

AIRR Community 2022 Executive Sub-committee Election

April 4, 2022 By Pam Borghardt

With each major meeting interval of the AIRR Community, elections are held for leadership positions on the AIRR-C Executive Sub-committee.  This spring, per our governance, we are seeking nominations for Executive SC Chair-Elect and up to three members of the Executive SC. To nominate an individual to serve on the AIRR-C Executive SC, the nominator […]

AIRR-C WG/SC Calls

All times are in ET (Americas/New York)

Click here for full calendar view

Call - ComRepo
10:00
Thu, May 26, 2022
BioRes WG - Call
10:00
Wed, June 1, 2022
Call - Software
11:30
Wed, June 1, 2022
Call - Legal & Ethics
12:00
Mon, June 13, 2022
Call - Standards
14:00
Mon, June 13, 2022

Recent AIRR Publications

  • Trück J et al, Biological controls for standardization and interpretation of adaptive immune receptor repertoire profiling (eLife, 2021)
  • Arnaout RA, Prak ETL, Schwab N, Rubelt F. Adaptive Immune Receptor Repertoire Community. The Future of Blood Testing Is the Immunome. (Frontiers in Immunology, 2021).

 
See all publications

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