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On AIRR Podcast Episode 12 Now Available!

May 30, 2023 by Edel Aron

In the latest episode of the On AIRR – An AIRR-C Podcast Series, Dr. Ulrik Stervbo and Dr. Zhaoqing Ding speak with Dr. Charlotte Deane (Professor of Structural Bioinformatics in the Department of Statistics in University of Oxford (UK) and head of the Oxford Protein Informatics Group) about the relevance of including protein structure to study and design antibodies, and the availability of such data. 

You can subscribe and listen in your favorite podcasting app or check out all of the On AIRR episodes here at http://onairr.airr-community.org or on the AIRR YT Channel. If you share podcast-related content in social media, please remember to use the hashtag #onairr!

 

Filed Under: AIRR Community Tagged With: Adaptive Immune Receptor Repertoire Community, podcast

2023 Science Writing Competition winners announced!

May 26, 2023 by Silvia Crescioli

To make science accessible, we need clear and concise communication. The Antibody Society thus offers our student and post-doc members a chance to grow this skill through a Science Writing Competition. This competition is organized and managed by the Society’s Communications & Membership Committee. Entrants submitted essays of 1200 – 1500 words on a topic related to antibody research that were evaluated by our panel of judges.

Our student winner is:

Rodrigo García Valiente, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands

Essay title: Antibodies, those party poopers

Our post-doc winner is:

Dr Zack Saud, Cardiff University, Cardiff, UK

Essay title: On the Origins of Antibodies: Natural and Man-made

Winning essays from previous Science Writing Competitions can be accessed here.

The next Science Writing Competition opens in February 2024.

Thanks to everyone who participated!

Filed Under: Competition, Immunology, Uncategorized Tagged With: Science Writing

FDA approves bispecific antibody EPKINLY™ (epcoritamab-bysp)

May 19, 2023 by Janice Reichert

On May 19, 2023, the US Food and Drug Administration approved EPKINLY™ (epcoritamab-bysp) for the treatment of adult patients with relapsed or refractory (R/R) diffuse large B-cell lymphoma (DLBCL), not otherwise specified, including DLBCL arising from indolent lymphoma, and high-grade B‑cell lymphoma, after two or more lines of systemic therapy. Created using Genmab’s DuoBody® technology, epcoritamab (GEN3013, DuoBody®-CD3xCD20) is a T cell-engaging bispecific IgG1k/l antibody targeting CD20 and CD3 that is jointly owned by Genmab and AbbVie. EPKINLY was approved under FDA’s accelerated approval program based on response rate and durability of response. Continued approval for this indication is contingent upon verification and description of clinical benefit in a confirmatory trial(s).

FDA’s approval was supported by data from the pivotal Phase 1/2 EPCORE NHL-1 trial (NCT03625037) studying epcoritamab in 157 patients with relapsed or refractory large B-cell lymphoma who had received at least two prior systemic therapies, including some who had received prior treatments with CAR-T cell therapy. The dose escalation findings from the Phase 1 part identified a dose of 48 mg as the recommended Phase 2 dose. In the Phase 2 part, patients received 48 mg of epcoritamab as 1 ml subcutaneous injections in 28-day cycles, with weekly dosing in Cycles 1-2, dosing every second week in Cycles 3-6, and dosing every 4 weeks from Cycle 7 onward. An overall response (complete or partial response) was seen in 61% (90/148 [95 percent confidence interval (CI): 52.5-68.7]) of patients and 38% (56/148 [95 percent CI: 30.0-46.2]) achieved complete remission. The median duration of response was 15.6 months (95 percent CI: 9.7-Not reached).

Epcoritamab is being investigated in multiple ongoing clinical studies across different settings and histologies. The most advanced of these is the randomized, open-label Phase 3 EPCORE™DLBCL-1 trial (NCT04628494) of epcoritamab vs investigator’s choice chemotherapy in patients with R/R DLBCL. The study is recruiting an estimated 552 patients and has an estimated primary completion date in June 2024.

Interested in data for other antibody therapeutics that have received marketing authorizations? Go to our searchable table of approved antibody therapeutics and those in regulatory review for more information.

Filed Under: Antibody therapeutic, Approvals, Food and Drug Administration Tagged With: antibody therapeutics, approved antibodies, diffuse large B-cell lymphoma, epcoritamab, Food and Drug Administration

On AIRR Podcast Episode 11 Now Available!

May 5, 2023 by Edel Aron

In the latest episode of the On AIRR – An AIRR-C Podcast Series, Dr. Ulrik Stervbo and Dr. Zhaoqing Ding speak with Dr. Xenophon Papademetris (Professor of Radiology and Biomedical Imaging, and Biomedical Engineering at Yale University) about the typical regulatory process for software classified as a medical device.

You can subscribe and listen in your favorite podcasting app or check out all of the On AIRR episodes here at http://onairr.airr-community.org. If you share podcast-related content in social media, please remember to use the hashtag #onairr!

 

Filed Under: AIRR Community Tagged With: Adaptive Immune Receptor Repertoire Community, podcast

partis is now certified as AIRR-compliant

May 3, 2023 by Edel Aron

The AIRR Community is excited to announce that partis has been certified as compliant with the AIRR-C v1.0 standard for AIRR-Seq software tools. partis is an HMM-based framework for B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction. It is built on top of the ham HMM compiler and ig-sw set of Smith-Waterman annotation tools. partis is free software under the GPL v3.

In an effort to enable rigorous and reproducible immune repertoire research at the largest scale possible, the AIRR-C Software Working Group has established a standard to validate software tools using the AIRR-C Standards and meeting a series of interoperability and quality criteria. Developers interested in certifying their tools should complete the checklist and submit it to the AIRR-C Software Working Group for evaluation and ratification by its members.

More details can be found at the website AIRR Software WG – Guidance for AIRR Software Tools.

All compliant tools will be issued a badge and listed on the website AIRR Software WG – List of Tools Certified as Compliant. The list currently includes CompAIRR, Dandelion, Immcantation, ImmuneDB, ImmuneML, Scirpy, SONAR and TRUST4 in addition to partis.

Filed Under: AIRR Community Tagged With: Adaptive Immune Receptor Repertoire Community, bioinformatics, Data Standards, diagnostics

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The Adaptive Immune Receptor Repertoire Community is a research-driven group organizing around the use of high-throughput sequencing technologies to study antibody/B-cell and T-cell receptor repertoires.

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